Coronavirus Disease Portal
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Page provides up-to-date genomics and precision health information on Coronavirus.
(Centers for Disease Control and Prevention (CDC), HHS)
Coronavirus genomes – NCBI Datasets
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Download datasets containing viral genome and protein sequences, annotation and a data report.
(National Center for Biotechnology Information (NCBI), NLM)
Database of Genotypes and Phenotypes (dbGaP)
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dbGaP was developed to archive and distribute the results of studies that have investigated the interaction of genotype and phenotype. Such studies include genome-wide association studies, medical sequencing, molecular diagnostic assays, as well as association between genotype and non-clinical traits.
Global Salmonella Resistome Data
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Tool provides visually informative displays of antibiotic resistance genes in bacteria. It is designed mainly for public health officials, academics and researchers who are using new genomics technologies to track and treat infectious diseases.
(U.S. Food & Drug Administration (FDA), HHS)
HuGE Navigator
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HuGE Navigator provides access to a continuously updated knowledge base in human genome epidemiology, including information on population prevalence of genetic variants, gene-disease associations, gene-gene and gene- environment interactions, and evaluation of genetic tests.
(Centers for Disease Control and Prevention (CDC), HHS)
Human Genome Resources
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Portal provides access to genome visualization and analysis tools, BLAST, NCBI Genome Remapping Service, and molecular databases.
(National Center for Biotechnology Information (NCBI), NLM)
Influenza Virus Resource - National Center for Biotechnology Information
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A browsing tool allows you to compare the sequenced variations of the influenza virus genome.
(National Library of Medicine (NLM), NIH)
National Newborn Screening & Global Resource Center
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An independent U.S. national resource center for newborn screening as well as global newborn screening information. Site provides consultative services, program reviews, selected national data, hosts a respected international discussion listserv, and provides information and resources for health professionals, consumers, public health professionals, and others.
Newborn Screening Coding and Terminology Guide
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Includes standard codes and terminology for newborn tests for the conditions recommended for screening by the Advisory Committee on Heritable Disorders in Newborns and Children (ACHDNC) or by a state within the U.S.
(National Library of Medicine (NLM), NIH)
Nextstrain
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Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data. Site provides a continually-updated view of publicly available data with powerful analytics and visualizations showing pathogen evolution and epidemic spread, with the goal of aiding epidemiological understanding and improving outbreak response.
(nextstrain)
PhenX Toolkit
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The toolkit provides standard measures related to complex diseases, phenotypic traits and environmental exposures. Use of PhenX measures facilitates combining data from a variety of studies, and makes it easy for investigators to expand a study design beyond the primary research focus.
(National Human Genome Research Institute)
Public Health Genomics and Precision Health Knowledge Base
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An online, continuously updated, searchable database of published scientific literature, CDC resources, and other materials that address the translation of genomic discoveries into improved health care and disease prevention.
(Centers for Disease Control and Prevention (CDC), HHS)
U.S. Genome Variation Estimates - National Office of Public Health Genomics
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These variation estimates are the allele frequency and genotype prevalence estimates of human genetic variants for the entire U.S. population based on DNA data collected from participants in the Third National Health and Nutrition Examination Survey (NHANES III).
(Centers for Disease Control and Prevention (CDC), HHS)